Skip to main content

Table 1 List of neuroscience entities of interest for NeuroMorpho.Org with their abbreviated form that is used in this article along with an example of its type and their distribution in the annotated sentences

From: Assisted neuroscience knowledge extraction via machine learning applied to neural reconstruction metadata on NeuroMorpho.Org

Entity

Abbreviation

Example

Count

Cell type

CEL

Interneuron

7549

Developmental stage

DEV

Adult

1243

Experimental condition

EXP

Control

9860

Sex or Gender

GEN

Female

685

Objective type

OBJ

Oil

156

Protocol

PRO

In vivo

1482

Reconstruction software

REC

Imaris

1209

Brain region

REG

Amygdala

8314

Slicing direction

SLI

Coronal

362

Species

SPE

Rat

4481

Staining method

STA

Biocytin

1402

Strain

STR

Wistar

3169

Total

–

–

39,876