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Fig. 4 | Brain Informatics

Fig. 4

From: SmaRT2P: a software for generating and processing smart line recording trajectories for population two-photon calcium imaging

Fig. 4

Background activity subtraction. a Top. Fluorescence activity of the ROIs segmented in an example SLS acquisition. Each row in the raster corresponds to the activity of a ROI. Bottom. Fluorescence activity of the same ROIs after the subtraction of the background activity. b Pairwise correlations between ROIs in a before (top) and after (bottom) the subtraction of the background activity. c. Average SNR (blue, left) and pairwise correlations (red, right) difference between background-subtracted and raw data for anesthetized (top) and awake animals (bottom). Extended values in Table 3

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