Table 2 Segmentation evaluations and comparisons
From: ID-Seg: an infant deep learning-based segmentation framework to improve limbic structure estimates
Dataset | Metric | Region | Segmentation method | F | p.adj | ||
|---|---|---|---|---|---|---|---|
dHCP | ID-Seg without pre-training | ID-Seg with pre-training | |||||
Internal dataset: ECHO-Dataset1 | DSC | L Amyg | 0.79 (0.12) | 0.76(0.07) | 0.86(0.03) | 8.81 | 0.001 |
(n = 20) | L Hippo | 0.76 (0.09) | 0.75 (0.08) | 0.87 (0.03) | 14.10 | < 10−4 | |
R Amy | 0.77 (0.14) | 0.76 (0.08) | 0.86 (0.03) | 6.31 | 0.003 | ||
R Hippo | 0.74 (0.15) | 0.76 (0.08) | 0.87 (0.03) | 10.67 | < 10−4 | ||
ICC | L Amyg | 0.87 (0.09) | 0.86 (0.05) | 0.92 (0.02) | 3.41 | 0.05 | |
L Hippo | 0.86 (0.08) | 0.85 (0.06) | 0.93 (0.02) | 4.75 | 0.024 | ||
R Amyg | 0.86 (0.13) | 0.86 (0.05) | 0.92 (0.02) | 3.79 | 0.05 | ||
R Hippo | 0.84 (0.13) | 0.86 (0.05) | 0.93 (0.01) | 5.89 | 0.02 | ||
ASD | L Amyg | 0.49 (0.34) | 0.41 (0.09) | 0.32 (0.11) | 5.89 | 0.007 | |
L Hippo | 0.60 (0.37) | 0.61 (0.59) | 0.26 (0.11) | 10.38 | 0.001 | ||
R Amyg | 0.53 (0.47) | 0.79 (1.3) | 0.31 (0.09) | 3.97 | 0.024 | ||
R Hippo | 0.65 (0.43) | 0.66 (0.57) | 0.26 (0.11) | 6.43 | 0.006 | ||
External dataset: M-CRIB | DSC | L Amyg | 0.73 (0.02) | 0.81 (0.03) | 0.88 (0.02) | 184.47 | < 10−4 |
(n = 10) | L Hippo | 0.67 (0.04) | 0.81 (0.03) | 0.88 (0.03) | 156.2 | < 10−4 | |
R Amyg | 0.67 (0.03) | 0.83 (0.04) | 0.87 (0.02) | 68.78 | < 10−4 | ||
R Hippo | 0.60 (0.04) | 0.83 (0.03) | 0.87 (0.03) | 109.61 | < 10−4 | ||
ICC | L Amyg | 0.86 (0.05) | 0.90 (0.01) | 0.93(0.01) | 195.48 | < 10−4 | |
L Hippo | 0.83 (0.06) | 0.91 (0.02) | 0.94(0.01) | 393.73 | < 10−4 | ||
R Amyg | 0.83 (0.06) | 0.90 (0.02) | 0.93(0.01) | 88.13 | < 10−4 | ||
R Hippo | 0.78 (0.09) | 0.91 (0.01) | 0.93(0.02) | 373.74 | < 10−4 | ||
ASD | L Amyg | 0.94 (0.13) | 0.55 (0.06) | 0.36 (0.11) | 190.95 | < 10−4 | |
L Hippo | 2.5 (0.29) | 0.37 (0.17) | 0.25 (0.06) | 158.59 | < 10−4 | ||
R Amyg | 1.1 (0.11) | 0.45 (0.09) | 0.41 (0.09) | 70.13 | < 10–4 | ||
R Hippo | 3.3 (0.44) | 0.41 (0.18) | 0.28 (0.06) | 112.71 | < 10–4 | ||