Fig. 6From: Fast cortical surface reconstruction from MRI using deep learningSurface morphometries measured in unseen datasets. To examine if FastCSR is generalizable to unseen datasets, we applied this method to the previously unseen ABIDE-II dataset with T1w images at 1.0-mm resolution and the HCP dataset with 0.7-mm resolution images. These data were also processed using the FreeSurfer pipeline. Cortical thickness and sulcal depth were estimated. a The average cortical thickness maps obtained from FreeSurfer (left) versus FastCSR (right) in the ABIDE-II dataset are similar, with only 0.07% of the vertices demonstrating significant difference (two-tailed paired t-tests, p < 0.01, FDR corrected). b For the HCP dataset, the average cortical thickness maps derived from FreeSurfer and FastCSR are also similar, with only 2.16% of the vertices showing significant difference (two-tailed paired t-tests, p < 0.01, i.e., − log10(p) > 2.0, FDR corrected). c The positive values in the sulcal depth maps indicate sulci (warm colors) and negative values indicate gyri (cool colors). For the ABIDE-II dataset, 2.44% of the vertices showed significant differences between the FreeSurfer and FastCSR method. Differences were mainly distributed in the insular cortices, the precentral gyrus, and the medial orbitofrontal cortices. d For the HCP dataset, 5.87% of the vertices showed significant difference in sulcal depth between FreeSurfer and FastCSRBack to article page